£67 Find Cheap Flights from Manila to Japan

This is the cheapest one-way flight price found by a KAYAK user in the last 72 hours by searching for a flight from Manila to Japan departing on 10/3. Fares are subject to change and may not be available on all flights or dates of travel. Click the price to replicate the search for this deal.
1 adult
1 adult, Economy, 0 bags

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Cheap Flights from Manila to Japan

Cheapest return prices found by our users on KAYAK in the last 72 hours
Tokyo
Tokyodirect£130
Fukuoka
Fukuoka1 stop£179
Tokyo
Tokyodirect£130
Fukuoka
Fukuoka1 stop£179

Book Cheap Manila to Japan Plane Tickets

 
Here are some of the best deals found on KAYAK recently from the most popular airlines for return flights from Manila to Japan that are departing in the next months. While these flights were available on KAYAK in the last 72 hours, prices and availability are subject to change and deals may expire.
Discover the best prices for you by selecting your travel dates on KAYAK.

Recent return flight deals from Manila to Japan

Mon, 15 Jun - Wed, 24 Jun
Philippines AirAsia Logo
04:35 - 10:10
MNL
-
NRT
4h 35mdirect
Philippines AirAsia Logo
11:10 - 14:50
NRT
-
MNL
4h 40mdirect
£130Philippines AirAsia
Thu, 28 May - Fri, 5 Jun
Jetstar Japan Logo
00:40 - 06:10
MNL
-
NRT
4h 30mdirect
Jetstar Japan Logo
19:40 - 23:40
NRT
-
MNL
5h 00mdirect
£131Jetstar Japan
Mon, 1 Jun - Sat, 6 Jun
Cebu Pacific Logo
12:15 - 18:00
MNL
-
NRT
4h 45mdirect
Cebu Pacific Logo
13:45 - 18:10
NRT
-
MNL
5h 25mdirect
£138Cebu Pacific
Mon, 1 Jun - Sat, 6 Jun
Cebu Pacific Logo
22:20 - 10:40
MNL
-
NRT
11h 20m
1 stop
Cebu Pacific Logo
13:45 - 18:10
NRT
-
MNL
5h 25mdirect
£143Cebu Pacific
Mon, 1 Jun - Sat, 6 Jun
Cathay Pacific Logo
10:50 - 21:35
MNL
-
HND
9h 45m
1 stop
Cathay Pacific Logo
10:05 - 19:05
HND
-
MNL
10h 00m
1 stop
£171Cathay Pacific
Mon, 15 Jun - Mon, 22 Jun
Philippine Airlines Logo
19:05 - 00:45
MNL
-
HND
4h 40mdirect
Philippine Airlines Logo
02:05 - 05:40
HND
-
MNL
4h 35mdirect
£180Philippine Airlines
Thu, 14 May - Sat, 23 May
Cathay Pacific Logo
10:50 - 21:35
MNL
-
HND
9h 45m
1 stop
Cathay Pacific Logo
16:20 - 00:15
HND
-
MNL
8h 55m
1 stop
£181Cathay Pacific
Mon, 15 Jun - Fri, 19 Jun
Philippine Airlines Logo
19:05 - 00:45
MNL
-
HND
4h 40mdirect
Philippine Airlines Logo
02:05 - 05:40
HND
-
MNL
4h 35mdirect
£191Philippine Airlines
Sun, 5 Apr - Sun, 26 Apr
Japan Airlines Logo
23:25 - 07:35
MNL
-
ITM
7h 10m
1 stop
Japan Airlines Logo
20:05 - 05:35
ITM
-
MNL
10h 30m
1 stop
£355Japan Airlines
Mon, 6 Apr - Fri, 10 Apr
Japan Airlines Logo
23:25 - 08:35
MNL
-
ITM
8h 10m
1 stop
Japan Airlines Logo
16:55 - 05:35
ITM
-
MNL
13h 40m
1 stop
£356Japan Airlines
Booking Insights

KAYAK's insights & trends for Manila to Japan flights

Get data-powered insights and trends into flights from Manila to Japan to help you find the cheapest flights, the best time to fly and much more.

What is the cheapest Manila to Japan flight route?

Data is based on round-trip flight searches on KAYAK over the past month.

The cheapest ticket to Japan from Manila found in the last 72 hours was to Osaka, at £108 return. The most popular route is from Manila (MNL) to Tokyo Narita Airport (NRT), and the cheapest round-trip airline ticket found on this route in the last 72 hours was £110.

Can I save money by flying with a stopover from Manila to Japan?

The average return price for all direct flights, flights with one stopover, and flights with two stopovers for the route found by users searching on KAYAK in the last 2 weeks.

No, with an average price for the route of £232, prices are generally cheapest when you fly direct.

What is the cheapest month to fly from Manila to Japan?

To calculate monthly average prices, KAYAK takes all prices for each month over the last year for round-trip flights from Manila to Japan, removes the top 0.1% to account for outliers, and then takes the median of all values for each month.

The cheapest month for flights from Manila to Japan is September, when tickets cost £125 (return) on average. On the other hand, the most expensive months are December and April, when the average cost of return tickets is £233 and £201 respectively.

What’s the cheapest day of the week to fly from Manila to Japan?

The average price of all round-trip flights from Manila to Japan clicked on KAYAK for each day over the last 12 months.

For Manila to Japan, Monday is the cheapest day to fly on average and Saturday is the most expensive. Flying from Japan back to Manila, the best deals are generally found on Wednesday, with Tuesday being the most expensive.

How far in advance should I book a flight from Manila to Japan?

To calculate weekly average prices, KAYAK takes all prices for each week before departure over the last year for round-trip flights from Manila to Japan, removes the top 0.1% to account for outliers, and then takes the average of all the values for each week.

To get a below-average price on a flight from Manila to Japan, you should book around 9 weeks before departure, which saves you about 35% compared to booking last-minute. For the absolute cheapest price, our data suggests you should book 17 weeks before departure.

Good to know - Cheap tickets from Manila to Japan

Low seasonAugust
Cheapest flight£94
Best time to beat the crowds (3% less expensive on average)
Most popular time to fly (30% more expensive on average)
Flight from Manila to Tokyo Narita Airport

Flights from Manila to Japan: the best tips from KAYAK users

Insights shared by verified travellers who flew the route from Manila to Japan 
Verified travelerFlew with Japan Airlines
MNL
-
NRT
Mar 2025
Be sure which terminal you are arriving and departing in Manila.
HFlew with Cebu Pacific
MNL
-
CTS
Apr 2025
Japan immigration and customs log online for faster clearance
BessieFlew with ANA
MNL
-
NRT
Sept 2024
ANA and JAL are always better. I try to take the first flight in the middle of the week.
KevinFlew with Cebu Pacific
MNL
-
NRT
Sept 2024
Bring charging cord as the have ports on the plane. You have to buy water, so get it in the airport, as 3 bottles is the same price as 1 warm bottle on the plane.
Verified travelerFlew with ANA
MNL
-
HND
Feb 2024
Arriving at Terminal 3 at JFK was better than other terminals at JFK. The USA citizen immigration line was fast, the luggage arrived quickly and the spot to get uber ride was so organized .

FAQs - booking Japan flights

  • How does KAYAK find such low prices on flights from Manila to Japan?

    KAYAK is a travel search engine. That means we look across the web to find the best prices we can find for our users. With over 2 billion flight queries processed yearly, we are able to display a variety of prices and options on flights from Manila to Japan.

  • How does KAYAK's flight Price Forecast tool help me choose the right time to buy my flight ticket from Manila to Japan?

    KAYAK’s flight Price Forecast tool uses historical data to determine whether the price for a flight from Manila to Japan is likely to change within 7 days, so travellers know whether to wait or book now.

  • What is the Hacker Fare option on flights from Manila to Japan?

    Hacker Fares allow you to combine one-way tickets in order to save you money over a traditional return ticket. You could then fly from Manila to Japan with an airline and back with another airline.

  • What is KAYAK's "flexible dates" feature and why should I care when looking for a flight from Manila to Japan?

    Sometimes travel dates aren't set in stone. If your preferred travel dates have some wiggle room, flexible dates will show you all the options when flying from Manila to Japan up to 3 days before/after your preferred dates. You can then pick the flights that suit you best.

  • What is the cheapest time of day to fly to Japan?

    The cheapest time of day to fly to Japan is generally at night, when retur flights cost £163 on average. The most expensive time of day to fly to Japan is generally in the afternoon, which is peak travel time and where the average cost of a ticket is £220.

Top tips for finding a cheap flight from Manila to Japan

  • Looking for a cheap flight from Manila to Japan? 25% of our users found tickets from Manila to Japan for the following prices or less: Tokyo £79 one-way - £144 round-trip

Reviews of the top 5 airlines flying from Manila to Japan

 
Need help choosing which airline to fly with from Manila to Japan? KAYAK airline reviews give an overall score for each airline based on loads of factors, including comfort, boarding, in-flight entertainment and more, to make your decision easier. See airline scores according to verified KAYAK customer reviews.
8.4
ANAOverall score based on 1078 reviews
8.2Comfort
8.7Crew
8.5Boarding
7.9Entertainment
7.7Food
Airline reviews

Cabin Crew was excellent. They took care of everything requested. Flight was good

10.0 ExcellentAnonymous, Jan 2026
ORD - HND
Read more ANA reviews

Cabin Crew was excellent. They took care of everything requested. Flight was good

I didn’t know that my connecting flight from Japan to Hawaii was at a different airport - arrived in Haneda (ticket said Tokyo but didn’t notice the airport name) and had to get my bags and go out of immigration and back in to go to Narita airport 2 hours away. Such a hassle and SOOO confusing and complicated. Check your airports IN ADVANCE and NEVER book if you have to change airports. 40+ years of flying and first time had this. Never again. ANA is great but booking agencies will sell you a connection that you have a good chance of missing - even under the best circumstances.

I was charged $200 for a 2nd checked bag, which is unreasonably high and feels like price gouging. Other than that the experience was excellent.

The ROOM was great. We would love to have it on all of our flights. LOL

I would prefer to fly with Japanese airlines over American ones. They have better food and service overall

I was too late to get onto this flight. Kayak shouldn't let you book a connecting international to domestic flight when flying ANA. Your domestic flight could be in a different terminal and you won't make it because you have to go through immigration and customs.

United Airlines crew members do not know how to deal with emergency situation that caused our flight delay. For example, they should have asked the maintenance or seat belt repair personnel to come and fix the seat belt while they were looking for a volunteer to book another flight.

I always take ANA because of the great service and overall experience.

Tokyo Haneda to transport was so bad too short time . and find out way to the gate was so bad. I almost missed flight. because confused. They need more great way tell us how to get there details

Entertainment and food is best. I love to use ana for a lots japanese movies…. Food was best

Between being the only jetstar flight delayed to changing gates at the last moment and starting boarding late, jetstar dropped the ball on this one. we had to run for last train. Never again

The seats are very uncomfortable just was not a pleasant experience

my flight was cancelled an hour before departure and i have not received a refund yet.

A child behind me was kicking my seat and the cabin attendant noticed and kindly asked me if I’d like to switch to a different available seat. Really nice.

The flight crew was very nice. Had a bit of a hiccup on my end when I checked in flying from Tokyo to Sapporo but the staff was very helpful. Definitely enjoyed both flights.

There was no social distancing on the plane. Lots of people sneezing, etc so the coronavirus measures they are taking are not adequate. Very uncomfortable flight. Also hard to get customer service support by phone in English.

My luggages were lost and the service attendant was extremely unprofessional. Despite presenting my luggage claim slips, the attendant stated she had “no record” of my bags and made no meaningful effort to assist. When I explained that the luggage contained our family’s complete scuba diving equipment, her response was dismissive, stating that she “didn’t care.” While lost luggage is frustrating on its own, the lack of professionalism and lack of empathy significantly worsened the situation.

Flight was good took off on time arrived early. Crew was awesome and did a great job. Very helpful and courteous. Bags arrived super fast with no hassles. Great flight!!!!!!

A shameful national carrier. Service has gone down from the highs of a decade before. You don’t feel the Filipino hospitality. It’s an aging fleet. Nil comfort, and I flew premium economy.

Excellent! All flight related was memorable ! My first experience with Mabuhay Lounge,,, not so good

Great. Always great service and their pilots know how to land planes properly

Food could of been better. Crew was pretty much average. It was raining a lot on arrival, had to take a bus to immigration building,

Flight was really good, considering the semi bad weather in MNL. Food was great. Crew kept offering throughout the flight. Wifi signal was intermittent though.

You have to pay $25 to get access to smoking lounge. One coffee and small bottle of water coupon provided. Max time 2 hrs for two entries total.

Everything was very good but seats are small for a big man!

Theairline, both at the terminal and during the entirety of the flight were kept at uncomfortably cold temps. Maybe between 55 and 60 f. Those who had traveled with the airline before donned puffer jackets, wool hats and pulled blankets from their carry-on bags. The seat back entertainment also failed on my trip, leaving me for 12 hrs. With nothing. Seats offered enough room (barely) for a 6'1" frame, but it was pretty tight But the worst offender was the uncomfortable temp..

Terrible. Not to be trusted. I missed a flight from Manila due to 3+ hours in traffic to the airport. Customer service was rude and unhelpful. I booked a new flight. The cost was steep. And on my credit card online account, Cebu Pacific charged me for two tickets, yet I'm traveling alone, one person. They are impossible to reach and pathetic customer service. My credit card company is looking into it. NEVER, NEVER fly Cebu Pacific. They will rip you off. They don't care, they don't have to. Fly another airline in the Philippines.

Most passengers going to Dumaguete early are tourists who are some booked thier ferry online. Mine was wasted because of delays cause by waiting on runway before taking off and too long before they let us go down...I could still make it in time if they let us go down early. We are just there waiting to go down the plane for 10-15mins.

We were allowed to board early, seats were spacious and we arrived early.

The seats were dirty. Food on tray table. Late on my first flight and almost an hour early on the return. My driver was unable to adjust and I had to pay for different ground transportation.

I had excellent experienced flying with Cebu Pacific on my domestic flight. However, no food and beverage serve might be due to short travel time of 40 minutes.

No entertainment and not expected. Cabin was very cold which brought the comfort score down

Your check in lines were terrible everything else was great!

flight cancelled.. booked through orbitz, yet orbitz won't handle refunds.. never use them again..

It arrived 18 minutes early. Attendant are good. For baording , they should improve especially carrying thru bus.

Super delayed. Delayed to get the bus, delayed to get off the bus, delayed to take off.

This flight was excellent in all ways if they could repeat it consistently they would grow immediately

Philippines AirAsia is never on-time flight, delayed 3 hours. Everything else was fine though.

Service it was good Lower airfare and discount for loyal customer

Not a good experience. They did not have the food I ordered in advance. The crew is not offer a second snack on a 5 hour flight. The WiFi was either not working or was very difficult to connect to.

The flight was delayed by an hour . Traveling with 75 year old father was difficult and then when he asked for water he was asked to purchase :-) . Overall just an ok experience.

Overall service is good, the only thing I would like airasia to improve is there seating. Their seat handles are broken as well as the back rest

Boarding with air asia is excellent via organized lines by zone except when there is only 1 gate agent and no scanner, only by tearing tickets??? Crazy

The flight was supposed to depart at 9:25. It departed at 9:00. Im glad we were early and did not miss it.

They wouldn't even allow us to bring water from the fountain on board the aircraft.

Premium seats should have legroom this one didn't have it. I had 2 free checked bag but I got charged for while it shows on my reservation

Everything you need to know for your flight from Manila to Japan

Information on your arrival and departure airports